General Microscopy
- Carl Zeiss MicroImaging Online Campus
- Confocal Laser Scanning Microscopy Principles
- Molecular Expressions: Exploring the World of Optics and Microscopy
- Nikon MicroscopyU
- Open Microscopy Environment (OME)
- SVI-Wiki on 3D Microscopy, Deconvolution, Visualization and Analysis
- Teaching Modules (EAMNET)
Fluorescence
- Bright Ideas for Chemical Biology
- Molecular Probes School of Fluorescence
- Nature Reviews Focus on Fluorescence Imaging
- Choosing Fluorophore Combinations for Confocal Microscopy (Olympus)
- Curv-O-Matic (Omega Optical)
- Fluorescence Dye and Filter Database (Zeiss)
- Fluorophores.org
- Fluorescence SpectraViewer (Life Technologies)
- Two-Photon Excitation Cross Sections
Sample Preparation
- ColorfullCell
- Histosearch: The Histology Search Engine
- IHC World
- Immunostaining Techniques (Millipore)
- Invitrogen Protocols (Invitrogen)
- MXS Chaining Kit
- Pierre Neveu Lab Plasmids
- Technical Center (Jackson ImmunoResearch)
- Vadlo (Biology Search Engine)
Colocalization
Image Processing and Analysis
- ImageJ Homepage
- Tutorials and Examples
- Fiji ImageJ Bundle
- Nikon ND2 Reader
- Volume Viewer
- Hypermedia Image Processing Reference
- Introduction to Confocal Microscopy and Image Analysis (by J. Paul Robinson)
- CellProfiler
- Confocal Assistant
- FreeSFP
- GNU Image Manipulation Program (GIMP)
- https://www.websiteplanet.com/webtools/imagecompressor/
- Huygens Suite
- ImageTrak
- IrfanView
- Microsoft Image Composite Editor
- MIPAV
- NIH Image
- NIS-Elements Viewer
- Paint.NET
- PhotochemCAD
- PIC-Viewer and WinFluor
- V3D
- VisBio
- Volocity Demo
- Zeiss LSM Image Browser
- XuvTools